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The Pfam database is a large collection of protein families, each represented by multiple sequence alignments and hidden Markov models (HMMs).

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小猴子加速器vnp-outline

The Rfam database is a collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models (CMs).

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小猴子加速器vnp-outline

The Dfam database is a collection of DNA tranposable element families, each represented by multiple sequence alignments, consensus sequences, and hidden Markov models. The Dfam database is hosted by the Institute for Systems Biology, Seattle, US.

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小猴子加速器vnp-outline

Treefam is a database composed of phylogenetic trees inferred from animal genomes. It provides orthology/parology predictions as well the evolutionary history of genes.

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小猴子加速器vnp-outline

AntiFam is a collection of hidden Markov models (HMMs) designed to identify spurious open reading frames (ORFs).

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The iPFam database is no longer available.

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